And is appreciate  your help if you see flaws in my orders that my character with greater understanding  then the player may not make

At this level, I don't actually think that Arthure would necessarily have a greater understanding than Dylan.  A level 2 necromancer vs all of the xp you got dumped into various types of power gaming?  I'd take the dial-on

X1 gnome headOrder: yell if something other then party gets within 10ft( kept mostly in a bag, typically deployed in middle of camp at night

X1 Talis- protect me

X2 Human- protect me.

These havent changed and dont need to?  

Programming time.

1 hour->4 old dead w/ broad swords

1 hour -> 4 old dead w/ broad swords

These 8 I would order to also defend me, unless someone else, like Val did, wanted a bodyguard(s). Which case is would do that.

1 hour -> x4 old dead 

Follow and be ready if a living party member is forced prone, to help them up.

1hour  -> x4 old dead be ready if a living party member is constrained/ grappled against their will, to assist with freeing them

1 hour -> x4 follow. If party threatened attempt to take hits in place of living members, but move out of way if ordered

1 hour-> x1( stupid odd number) follow me and try to take any harmful attacks in my place

6 hours total. If I need to redo others let me know.

Program is at 4.

Control at 4 and command at 2 

- This was what I remembered.  This would also result in them slashing at each other more than you would want, as an example of the problems you were dealing with.

Clearing jungle.

Last week the order was to stand out front and slash away anything in our way.

That seemed to work for pur travel through the jungle.

I will work on updates

You got 5 days worth of time to sort this out, and are absolutely encouraged to do so before next week.

Gnome head. Yells if something other then party gets within 10ft

Snake protect Val

8 were clearning the ungle. 

13 were told to stand around me( generally  not like super close) basically  being meat shields to get hit instead of us.

This was as of at the end of the last session I was at. We ended shortly after that  battle. 

So how long has passed dor me to potentially  update these? Or will that need to be done in game next week?

Animate Dead 3->4

Control dead 3->4

Command Undead 1->2

Although this served a meta-purpose, I do think this might be legitimate in game as well.  If you would like to resolve this, please verify or detail what orders you currently have programmed for which zombies.  Your shorthand in your first post seems to be minorly different than what was stated in person last week, and both are potentially causing problems which would need your intervention.  And since you can only intervene on 3 at a time...  

Research 1->2

Armored Undead 1->2

Animate Dead 3->4